BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027H07LP1|AL428804
(831 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1700 1463 0.0
>3x_Contig1700
Length = 16332
Score = 1463 bits (724), Expect = 0.0
Identities = 792/830 (95%)
Strand = Plus / Plus
Query: 2 atgtgtgtagatgagaatcaccactttctcgacttacaatwaggttcgaagaatccgttt 61
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 7599 atgtgtgtagatgagaatcaccactttctcgacttacaataaggttcgaagaatccgttt 7658
Query: 62 cacagttgatcagaggagatataggtaawaggccttagaatacacaccatatcttattgc 121
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 7659 cacagttgatcagaggagatataggtaaaaggccttagaatacacaccatatcttattgc 7718
Query: 122 tttwcatgcwgcwagactggdatwagagatttttctgacattgtagttatcaaggtttcc 181
||| ||||| || ||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 7719 tttacatgcagcaagactggaataagagatttttctgacattgtagttatcaaggtttcc 7778
Query: 182 tattggtgcacagaagattattwttgwgtctttccagcggtgatgaagatagcgattggg 241
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 7779 tattggtgcacagaagattataaatgagtctttccagcggtgatgaagatagcgattggg 7838
Query: 242 agacgttgggcagaggattccctgatctttcgcggctttcgttgaagtttcaatgggata 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7839 agacgttgggcagaggattccctgatctttcgcggctttcgttgaagtttcaatgggata 7898
Query: 302 gttttwtgtcagacttgcwggggggtgctacttttwgcggggcgctggatcgtttacaga 361
||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 7899 gttttatgtcagacttgcaggggggtgctacttttagcggggcgctggatcgtttacaga 7958
Query: 362 cactcaaggcgaggtgggatactatgttactgatcctwccttcgtatgchgaacggggaa 421
||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||
Sbjct: 7959 cactcaaggcgaggtgggatactatgttactgaacctaccttcgtatgcagaacggggaa 8018
Query: 422 gttcttctccgcatgacgatggcaaattaggtacaagggatgahtcaggtactgattcat 481
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 8019 gttcttctccgcatgacgatggcaaaaaaggtacaagggatgaatcaggtactgattcaa 8078
Query: 482 aggataaggctagtgctggtatcggtattgccaatgaggagatawwgggtccggwgcata 541
|||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 8079 aggataaggctagtgctggtatcggtattgccaatgaggagataaagggtccggagcata 8138
Query: 542 ccgatcctwctgttgtgacttaggttcattcggtgatgcatccgacgatgtacacgawcg 601
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 8139 ccgatcctactgttgtgactaaggttcattcggtgatgcatccgacgatgtacacgaacg 8198
Query: 602 atttagtgatgccaatggatattkaytattcggtattywcgcattgggatgtaaaattca 661
||||||||||||||||||||| | ||| ||| ||| |||||||||||||||||||||
Sbjct: 8199 atttagtgatgccaatggataaagaatatacggaattaacgcattgggatgtaaaattca 8258
Query: 662 atcaggatgaggatgcgttaaggtcgaggatcaaaaaaatcagagcgttggttgatttgt 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8259 atcaggatgaggatgcgttaaggtcgaggatcaaaaaaatcagagcgttggttgatttgt 8318
Query: 722 caganacacaaaaggcatccatgatccaaacgctaatgatgaagcatgccactgtaccaa 781
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8319 cagaaacacaaaaggcatccatgatccaaacgctaatgatgaagcatgccactgtaccaa 8378
Query: 782 gcgagcataccggtagttcgcattcgcatgantctgacgagctggtctct 831
|||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 8379 gcgagcataccggttgttcgcattcgcatgaatctgacgagctggtctct 8428
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3336
Number of Sequences: 1807
Number of extensions: 3336
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 831
length of database: 10,358,551
effective HSP length: 16
effective length of query: 815
effective length of database: 10,329,639
effective search space: 8418655785
effective search space used: 8418655785
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.7 bits)
S2: 49 (99.5 bits)